Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Slc46a2Q8CA03 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.63□□□□□ -0.07
Slc46a2Q8CA03 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Gm13312-201ENSMUST00000119631 718 ntBASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Slc46a2Q8CA03 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm9013-201ENSMUST00000132939 882 ntBASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm6623-201ENSMUST00000173570 544 ntBASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm23634-201ENSMUST00000175071 91 ntBASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm9172-201ENSMUST00000212092 954 ntBASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Slc46a2Q8CA03 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.6□□□□□ -0.07
Slc46a2Q8CA03 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc46a2Q8CA03 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Slc46a2Q8CA03 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc46a2Q8CA03 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc46a2Q8CA03 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc46a2Q8CA03 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Slc46a2Q8CA03 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc46a2Q8CA03 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms