Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a6Q8C6K9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Gm25144-201ENSMUST00000179561 110 ntBASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Gm25352-201ENSMUST00000179815 110 ntBASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Gm14127-201ENSMUST00000117906 678 ntBASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a6Q8C6K9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Gm43703-201ENSMUST00000200523 763 ntBASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a6Q8C6K9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a6Q8C6K9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms