Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Gm18115-201ENSMUST00000221209 621 ntBASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tsen54Q8C2A2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tsen54Q8C2A2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Tsen54Q8C2A2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tsen54Q8C2A2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tsen54Q8C2A2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.74□□□□□ -0.37
Tsen54Q8C2A2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tsen54Q8C2A2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tsen54Q8C2A2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.74□□□□□ -0.37
Tsen54Q8C2A2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tsen54Q8C2A2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms