Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lsm11Q8BUV6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lsm11Q8BUV6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm11Q8BUV6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Gm6623-201ENSMUST00000173570 544 ntBASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lsm11Q8BUV6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Gm6345-202ENSMUST00000180900 204 ntBASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lsm11Q8BUV6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm11Q8BUV6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm11Q8BUV6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm11Q8BUV6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm11Q8BUV6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm11Q8BUV6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm11Q8BUV6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lsm11Q8BUV6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Lsm11Q8BUV6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm11Q8BUV6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms