Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm43767-201ENSMUST00000198933 381 ntBASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Mir449b-201ENSMUST00000104833 80 ntBASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Gm11543-201ENSMUST00000120758 370 ntBASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Gm25948-201ENSMUST00000175334 112 ntBASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Scfd1Q8BRF7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Gm18737-201ENSMUST00000173594 937 ntBASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scfd1Q8BRF7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Gm10253-201ENSMUST00000194270 940 ntBASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scfd1Q8BRF7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scfd1Q8BRF7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms