Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col16a1Q8BLX7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 App-207ENSMUST00000227737 2827 ntBASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col16a1Q8BLX7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col16a1Q8BLX7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Gm21854-201ENSMUST00000179901 471 ntBASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 AC149294.4-201ENSMUST00000227870 882 ntBASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Gm15823-201ENSMUST00000064305 670 ntBASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col16a1Q8BLX7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Gm11478-201ENSMUST00000117851 599 ntBASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col16a1Q8BLX7 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Gm9522-201ENSMUST00000182394 926 ntBASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Gm9115-201ENSMUST00000120192 1348 ntBASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col16a1Q8BLX7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms