Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn3bQ8BHK2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3bQ8BHK2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3bQ8BHK2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Scn3bQ8BHK2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3bQ8BHK2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3bQ8BHK2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms