Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm43767-201ENSMUST00000198933 381 ntBASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx58Q6Q899 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.74■□□□□ 0.59
Ddx58Q6Q899 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.74■□□□□ 0.59
Ddx58Q6Q899 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx58Q6Q899 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Gm13616-201ENSMUST00000120600 222 ntBASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx58Q6Q899 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.71■□□□□ 0.59
Ddx58Q6Q899 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms