Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm8825-201ENSMUST00000182565 998 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm4518-201ENSMUST00000182638 718 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm9172-201ENSMUST00000212092 954 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tpm4Q6IRU2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm4Q6IRU2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.02■□□□□ 0.32
Tpm4Q6IRU2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Tpm4Q6IRU2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Tpm4Q6IRU2 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms