Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ift88Q61371 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ift88Q61371 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.85■□□□□ 0.29
Ift88Q61371 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.85■□□□□ 0.29
Ift88Q61371 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ift88Q61371 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.85■□□□□ 0.29
Ift88Q61371 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.85■□□□□ 0.29
Ift88Q61371 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ift88Q61371 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ift88Q61371 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.85■□□□□ 0.29
Ift88Q61371 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ift88Q61371 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.84■□□□□ 0.29
Ift88Q61371 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ift88Q61371 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.84■□□□□ 0.29
Ift88Q61371 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.84■□□□□ 0.29
Ift88Q61371 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ift88Q61371 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Ift88Q61371 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ift88Q61371 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.84■□□□□ 0.29
Ift88Q61371 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ift88Q61371 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Ift88Q61371 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ift88Q61371 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Ift88Q61371 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ift88Q61371 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ift88Q61371 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Ift88Q61371 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
Ift88Q61371 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Ift88Q61371 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ift88Q61371 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Ift88Q61371 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.83■□□□□ 0.28
Ift88Q61371 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.83■□□□□ 0.28
Ift88Q61371 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ift88Q61371 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Ift88Q61371 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ift88Q61371 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ift88Q61371 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ift88Q61371 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.82■□□□□ 0.28
Ift88Q61371 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms