Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
FntaQ61239 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FntaQ61239 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FntaQ61239 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FntaQ61239 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FntaQ61239 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FntaQ61239 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.13■□□□□ 0.17
FntaQ61239 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FntaQ61239 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FntaQ61239 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.12■□□□□ 0.17
FntaQ61239 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.12■□□□□ 0.17
FntaQ61239 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.12■□□□□ 0.17
FntaQ61239 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.12■□□□□ 0.17
FntaQ61239 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FntaQ61239 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.12■□□□□ 0.17
FntaQ61239 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FntaQ61239 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.12■□□□□ 0.17
FntaQ61239 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FntaQ61239 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
FntaQ61239 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FntaQ61239 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Gm6345-202ENSMUST00000180900 204 ntBASIC16.11■□□□□ 0.17
FntaQ61239 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FntaQ61239 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FntaQ61239 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FntaQ61239 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.11■□□□□ 0.17
FntaQ61239 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
FntaQ61239 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.1■□□□□ 0.17
FntaQ61239 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Gm13312-201ENSMUST00000119631 718 ntBASIC16.1■□□□□ 0.17
FntaQ61239 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.1■□□□□ 0.17
FntaQ61239 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.1■□□□□ 0.17
FntaQ61239 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FntaQ61239 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FntaQ61239 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.09■□□□□ 0.17
FntaQ61239 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.09■□□□□ 0.17
FntaQ61239 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Gm11950-201ENSMUST00000121615 838 ntBASIC16.09■□□□□ 0.17
FntaQ61239 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.09■□□□□ 0.17
FntaQ61239 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
FntaQ61239 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FntaQ61239 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms