Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav3-3Q5R1C3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-3Q5R1C3 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Gm38027-201ENSMUST00000192315 235 ntBASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav3-3Q5R1C3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms