Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Gm5566-201ENSMUST00000116118 459 ntBASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Gm8515-201ENSMUST00000194852 576 ntBASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Gm6218-201ENSMUST00000219812 628 ntBASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-2Q5R1B6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Gm6745-201ENSMUST00000199216 526 ntBASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-2Q5R1B6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Gm11478-201ENSMUST00000117851 599 ntBASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-2Q5R1B6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Gm6912-201ENSMUST00000117218 544 ntBASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Gm29667-201ENSMUST00000190817 490 ntBASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-2Q5R1B6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav8d-2Q5R1B6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav8d-2Q5R1B6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav8d-2Q5R1B6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms