Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Gm6089-201ENSMUST00000197666 938 ntBASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Gm6376-201ENSMUST00000209407 580 ntBASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv4Q5R1A3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Gm25990-201ENSMUST00000102440 86 ntBASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Gm7153-201ENSMUST00000117092 455 ntBASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Gm8318-201ENSMUST00000182954 872 ntBASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Rps4l-201ENSMUST00000071745 943 ntBASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv4Q5R1A3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv4Q5R1A3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv4Q5R1A3 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.54□□□□□ -0.4
Trdv4Q5R1A3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv4Q5R1A3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv4Q5R1A3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv4Q5R1A3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv4Q5R1A3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms