Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.2□□□□□ -0.3
Q3U1D9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Q3U1D9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Q3U1D9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Q3U1D9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.19□□□□□ -0.3
Q3U1D9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Q3U1D9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Q3U1D9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.19□□□□□ -0.3
Q3U1D9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.19□□□□□ -0.3
Q3U1D9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.19□□□□□ -0.3
Q3U1D9 Gm10154-201ENSMUST00000084445 354 ntBASIC13.19□□□□□ -0.3
Q3U1D9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Q3U1D9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Q3U1D9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.19□□□□□ -0.3
Q3U1D9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.19□□□□□ -0.3
Q3U1D9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q3U1D9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.19□□□□□ -0.3
Q3U1D9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Q3U1D9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Q3U1D9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Q3U1D9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.18□□□□□ -0.3
Q3U1D9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.18□□□□□ -0.3
Q3U1D9 Rprl2-201ENSMUST00000157150 290 ntBASIC13.18□□□□□ -0.3
Q3U1D9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.18□□□□□ -0.3
Q3U1D9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.18□□□□□ -0.3
Q3U1D9 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.18□□□□□ -0.3
Q3U1D9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Q3U1D9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Q3U1D9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Q3U1D9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Q3U1D9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q3U1D9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Q3U1D9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.17□□□□□ -0.3
Q3U1D9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Q3U1D9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q3U1D9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms