Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Gm10154-201ENSMUST00000084445 354 ntBASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Gm15920-201ENSMUST00000118998 402 ntBASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Rpph1-201ENSMUST00000175096 319 ntBASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Gm43474-201ENSMUST00000196415 774 ntBASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1l3Q2EG98 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1l3Q2EG98 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Gm13365-201ENSMUST00000121188 973 ntBASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Mir1895-201ENSMUST00000122615 79 ntBASIC13.62□□□□□ -0.23
Pkd1l3Q2EG98 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms