Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Gm7284-201ENSMUST00000131667 944 ntBASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Gm27704-201ENSMUST00000185094 107 ntBASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Gm7977-201ENSMUST00000193787 748 ntBASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Gm33142-201ENSMUST00000193913 867 ntBASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ptchd3Q0EEE2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Olfr129-201ENSMUST00000122318 993 ntBASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ptchd3Q0EEE2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ptchd3Q0EEE2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.71□□□□□ -0.06
Ptchd3Q0EEE2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ptchd3Q0EEE2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ptchd3Q0EEE2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ptchd3Q0EEE2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ptchd3Q0EEE2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms