Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cacna1aP97445 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1aP97445 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Cacna1aP97445 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Cacna1aP97445 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cacna1aP97445 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 Gm13453-201ENSMUST00000118708 357 ntBASIC14.02□□□□□ -0.17
Cacna1aP97445 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cacna1aP97445 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1aP97445 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Gm14928-201ENSMUST00000120198 477 ntBASIC14.01□□□□□ -0.17
Cacna1aP97445 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.01□□□□□ -0.17
Cacna1aP97445 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Gm18737-201ENSMUST00000173594 937 ntBASIC14.01□□□□□ -0.17
Cacna1aP97445 Gm24158-201ENSMUST00000175263 71 ntBASIC14.01□□□□□ -0.17
Cacna1aP97445 Mir3102-201ENSMUST00000175555 104 ntBASIC14.01□□□□□ -0.17
Cacna1aP97445 Gm27989-201ENSMUST00000184721 107 ntBASIC14.01□□□□□ -0.17
Cacna1aP97445 Gm28630-201ENSMUST00000187806 498 ntBASIC14.01□□□□□ -0.17
Cacna1aP97445 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1aP97445 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1aP97445 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cacna1aP97445 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14□□□□□ -0.17
Cacna1aP97445 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14□□□□□ -0.17
Cacna1aP97445 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14□□□□□ -0.17
Cacna1aP97445 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cacna1aP97445 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cacna1aP97445 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cacna1aP97445 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Cacna1aP97445 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Cacna1aP97445 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1aP97445 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1aP97445 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1aP97445 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cacna1aP97445 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1aP97445 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cacna1aP97445 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1aP97445 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1aP97445 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms