Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim43cP86449 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim43cP86449 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Trim43cP86449 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim43cP86449 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim43cP86449 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim43cP86449 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim43cP86449 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.53■□□□□ 0.24
Trim43cP86449 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.53■□□□□ 0.24
Trim43cP86449 Mzt1-203ENSMUST00000227948 952 ntBASIC16.53■□□□□ 0.24
Trim43cP86449 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Gm7461-201ENSMUST00000058918 827 ntBASIC16.53■□□□□ 0.24
Trim43cP86449 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim43cP86449 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim43cP86449 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim43cP86449 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Trim43cP86449 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim43cP86449 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim43cP86449 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim43cP86449 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim43cP86449 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim43cP86449 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim43cP86449 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim43cP86449 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim43cP86449 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim43cP86449 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trim43cP86449 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim43cP86449 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim43cP86449 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim43cP86449 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim43cP86449 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim43cP86449 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim43cP86449 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim43cP86449 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.52■□□□□ 0.23
Trim43cP86449 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim43cP86449 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim43cP86449 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim43cP86449 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim43cP86449 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim43cP86449 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim43cP86449 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trim43cP86449 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim43cP86449 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trim43cP86449 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms