Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SgcaP82350 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SgcaP82350 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.78□□□□□ -0.36
SgcaP82350 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SgcaP82350 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.78□□□□□ -0.36
SgcaP82350 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.78□□□□□ -0.36
SgcaP82350 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SgcaP82350 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.77□□□□□ -0.36
SgcaP82350 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.77□□□□□ -0.36
SgcaP82350 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcaP82350 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcaP82350 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcaP82350 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcaP82350 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcaP82350 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SgcaP82350 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.77□□□□□ -0.37
SgcaP82350 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.77□□□□□ -0.37
SgcaP82350 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SgcaP82350 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SgcaP82350 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SgcaP82350 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SgcaP82350 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.77□□□□□ -0.37
SgcaP82350 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SgcaP82350 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Gm16061-201ENSMUST00000122167 857 ntBASIC12.76□□□□□ -0.37
SgcaP82350 Gm6257-201ENSMUST00000163864 910 ntBASIC12.76□□□□□ -0.37
SgcaP82350 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.76□□□□□ -0.37
SgcaP82350 Gm22240-201ENSMUST00000175225 82 ntBASIC12.76□□□□□ -0.37
SgcaP82350 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.76□□□□□ -0.37
SgcaP82350 Gm2274-201ENSMUST00000184539 609 ntBASIC12.76□□□□□ -0.37
SgcaP82350 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.76□□□□□ -0.37
SgcaP82350 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Gm10812-201ENSMUST00000099864 546 ntBASIC12.76□□□□□ -0.37
SgcaP82350 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.76□□□□□ -0.37
SgcaP82350 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.76□□□□□ -0.37
SgcaP82350 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.76□□□□□ -0.37
SgcaP82350 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SgcaP82350 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SgcaP82350 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SgcaP82350 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms