Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp9xP70398 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp9xP70398 Gm13226-201ENSMUST00000117838 404 ntBASIC12.53□□□□□ -0.4
Usp9xP70398 Gm8062-201ENSMUST00000139696 444 ntBASIC12.53□□□□□ -0.4
Usp9xP70398 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp9xP70398 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp9xP70398 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp9xP70398 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp9xP70398 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Usp9xP70398 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp9xP70398 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp9xP70398 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp9xP70398 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.52□□□□□ -0.4
Usp9xP70398 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp9xP70398 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.52□□□□□ -0.4
Usp9xP70398 Gm27892-201ENSMUST00000185017 106 ntBASIC12.52□□□□□ -0.4
Usp9xP70398 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.52□□□□□ -0.4
Usp9xP70398 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Usp9xP70398 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.52□□□□□ -0.4
Usp9xP70398 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp9xP70398 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Usp9xP70398 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Usp9xP70398 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Usp9xP70398 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Usp9xP70398 Gm10499-201ENSMUST00000174094 934 ntBASIC12.52□□□□□ -0.41
Usp9xP70398 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp9xP70398 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.52□□□□□ -0.41
Usp9xP70398 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp9xP70398 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.52□□□□□ -0.41
Usp9xP70398 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp9xP70398 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.51□□□□□ -0.41
Usp9xP70398 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Usp9xP70398 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.51□□□□□ -0.41
Usp9xP70398 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp9xP70398 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp9xP70398 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Usp9xP70398 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Usp9xP70398 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp9xP70398 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp9xP70398 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Usp9xP70398 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp9xP70398 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp9xP70398 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usp9xP70398 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.5□□□□□ -0.41
Usp9xP70398 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp9xP70398 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usp9xP70398 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp9xP70398 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Usp9xP70398 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms