Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.51□□□□□ -0.25
Sf3b6P59708 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Gm25406-201ENSMUST00000157599 105 ntBASIC13.51□□□□□ -0.25
Sf3b6P59708 Gm6623-201ENSMUST00000173570 544 ntBASIC13.51□□□□□ -0.25
Sf3b6P59708 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.51□□□□□ -0.25
Sf3b6P59708 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sf3b6P59708 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.51□□□□□ -0.25
Sf3b6P59708 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.51□□□□□ -0.25
Sf3b6P59708 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.5□□□□□ -0.25
Sf3b6P59708 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Gm14859-201ENSMUST00000117752 357 ntBASIC13.5□□□□□ -0.25
Sf3b6P59708 Gm12008-201ENSMUST00000117791 755 ntBASIC13.5□□□□□ -0.25
Sf3b6P59708 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Gm33142-201ENSMUST00000193913 867 ntBASIC13.5□□□□□ -0.25
Sf3b6P59708 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.5□□□□□ -0.25
Sf3b6P59708 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.5□□□□□ -0.25
Sf3b6P59708 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.5□□□□□ -0.25
Sf3b6P59708 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sf3b6P59708 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.5□□□□□ -0.25
Sf3b6P59708 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3b6P59708 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sf3b6P59708 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.49□□□□□ -0.25
Sf3b6P59708 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.49□□□□□ -0.25
Sf3b6P59708 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sf3b6P59708 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.49□□□□□ -0.25
Sf3b6P59708 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Sf3b6P59708 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sf3b6P59708 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Sf3b6P59708 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3b6P59708 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sf3b6P59708 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.49□□□□□ -0.25
Sf3b6P59708 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms