Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Gm14722-201ENSMUST00000118943 689 ntBASIC17.24■□□□□ 0.35
Usp25P57080 Gm23634-201ENSMUST00000175071 91 ntBASIC17.24■□□□□ 0.35
Usp25P57080 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.24■□□□□ 0.35
Usp25P57080 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp25P57080 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp25P57080 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp25P57080 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.24■□□□□ 0.35
Usp25P57080 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp25P57080 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp25P57080 Gm25016-201ENSMUST00000158399 131 ntBASIC17.23■□□□□ 0.35
Usp25P57080 Gm6623-201ENSMUST00000173570 544 ntBASIC17.23■□□□□ 0.35
Usp25P57080 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp25P57080 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp25P57080 Gm5587-201ENSMUST00000206270 674 ntBASIC17.23■□□□□ 0.35
Usp25P57080 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Usp25P57080 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Usp25P57080 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Usp25P57080 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Usp25P57080 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.23■□□□□ 0.35
Usp25P57080 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp25P57080 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp25P57080 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 AA414768-201ENSMUST00000121924 1257 ntBASIC17.22■□□□□ 0.35
Usp25P57080 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp25P57080 Gm6659-201ENSMUST00000174752 547 ntBASIC17.22■□□□□ 0.35
Usp25P57080 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
Usp25P57080 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.22■□□□□ 0.35
Usp25P57080 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp25P57080 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Usp25P57080 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.21■□□□□ 0.35
Usp25P57080 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.21■□□□□ 0.35
Usp25P57080 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp25P57080 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Usp25P57080 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Usp25P57080 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Usp25P57080 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp25P57080 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp25P57080 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp25P57080 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp25P57080 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Usp25P57080 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms