Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Cdh11P55288 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.89□□□□□ -0.19
Cdh11P55288 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdh11P55288 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.88□□□□□ -0.19
Cdh11P55288 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdh11P55288 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.88□□□□□ -0.19
Cdh11P55288 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdh11P55288 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.88□□□□□ -0.19
Cdh11P55288 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.88□□□□□ -0.19
Cdh11P55288 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.88□□□□□ -0.19
Cdh11P55288 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdh11P55288 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.88□□□□□ -0.19
Cdh11P55288 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdh11P55288 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdh11P55288 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdh11P55288 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.87□□□□□ -0.19
Cdh11P55288 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdh11P55288 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Cdh11P55288 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.87□□□□□ -0.19
Cdh11P55288 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.87□□□□□ -0.19
Cdh11P55288 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.87□□□□□ -0.19
Cdh11P55288 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdh11P55288 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdh11P55288 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cdh11P55288 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Cdh11P55288 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdh11P55288 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdh11P55288 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Cdh11P55288 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.86□□□□□ -0.19
Cdh11P55288 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms