Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Atoh1P48985 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Gm6912-201ENSMUST00000117218 544 ntBASIC17.09■□□□□ 0.33
Atoh1P48985 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.09■□□□□ 0.33
Atoh1P48985 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Gm45384-201ENSMUST00000210451 277 ntBASIC17.09■□□□□ 0.33
Atoh1P48985 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.09■□□□□ 0.33
Atoh1P48985 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Atoh1P48985 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Atoh1P48985 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Atoh1P48985 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Atoh1P48985 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atoh1P48985 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.08■□□□□ 0.33
Atoh1P48985 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.08■□□□□ 0.33
Atoh1P48985 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Atoh1P48985 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atoh1P48985 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Atoh1P48985 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Atoh1P48985 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Atoh1P48985 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Atoh1P48985 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.08■□□□□ 0.32
Atoh1P48985 Gm11478-201ENSMUST00000117851 599 ntBASIC17.08■□□□□ 0.32
Atoh1P48985 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.08■□□□□ 0.32
Atoh1P48985 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Atoh1P48985 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.08■□□□□ 0.32
Atoh1P48985 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.08■□□□□ 0.32
Atoh1P48985 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.08■□□□□ 0.32
Atoh1P48985 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.08■□□□□ 0.32
Atoh1P48985 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.08■□□□□ 0.32
Atoh1P48985 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atoh1P48985 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atoh1P48985 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.07■□□□□ 0.32
Atoh1P48985 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Atoh1P48985 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.07■□□□□ 0.32
Atoh1P48985 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atoh1P48985 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Atoh1P48985 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atoh1P48985 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Mir1897-201ENSMUST00000122581 272 ntBASIC17.07■□□□□ 0.32
Atoh1P48985 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.07■□□□□ 0.32
Atoh1P48985 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
Atoh1P48985 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atoh1P48985 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atoh1P48985 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atoh1P48985 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atoh1P48985 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.06■□□□□ 0.32
Atoh1P48985 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atoh1P48985 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atoh1P48985 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.06■□□□□ 0.32
Atoh1P48985 Gm12138-201ENSMUST00000122180 951 ntBASIC17.06■□□□□ 0.32
Atoh1P48985 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.06■□□□□ 0.32
Atoh1P48985 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atoh1P48985 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atoh1P48985 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atoh1P48985 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atoh1P48985 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atoh1P48985 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms