Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GdnfP48540 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.35□□□□□ -0.27
GdnfP48540 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GdnfP48540 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.35□□□□□ -0.27
GdnfP48540 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.35□□□□□ -0.27
GdnfP48540 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
GdnfP48540 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
GdnfP48540 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GdnfP48540 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.34□□□□□ -0.27
GdnfP48540 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GdnfP48540 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.34□□□□□ -0.27
GdnfP48540 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
GdnfP48540 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GdnfP48540 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.34□□□□□ -0.27
GdnfP48540 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.34□□□□□ -0.27
GdnfP48540 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.34□□□□□ -0.27
GdnfP48540 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.34□□□□□ -0.27
GdnfP48540 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.34□□□□□ -0.27
GdnfP48540 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GdnfP48540 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GdnfP48540 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GdnfP48540 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
GdnfP48540 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GdnfP48540 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GdnfP48540 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GdnfP48540 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.33□□□□□ -0.28
GdnfP48540 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.33□□□□□ -0.28
GdnfP48540 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GdnfP48540 Gm14859-201ENSMUST00000117752 357 ntBASIC13.33□□□□□ -0.28
GdnfP48540 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.33□□□□□ -0.28
GdnfP48540 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.33□□□□□ -0.28
GdnfP48540 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GdnfP48540 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GdnfP48540 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
GdnfP48540 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GdnfP48540 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GdnfP48540 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
GdnfP48540 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
GdnfP48540 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GdnfP48540 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms