Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sdc2P43407 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sdc2P43407 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Sdc2P43407 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.09■□□□□ 0.33
Sdc2P43407 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.09■□□□□ 0.33
Sdc2P43407 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc2P43407 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc2P43407 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc2P43407 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sdc2P43407 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc2P43407 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc2P43407 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc2P43407 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc2P43407 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sdc2P43407 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Sdc2P43407 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Gm12644-201ENSMUST00000119935 606 ntBASIC17.08■□□□□ 0.32
Sdc2P43407 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.08■□□□□ 0.32
Sdc2P43407 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sdc2P43407 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc2P43407 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.07■□□□□ 0.32
Sdc2P43407 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sdc2P43407 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.07■□□□□ 0.32
Sdc2P43407 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.07■□□□□ 0.32
Sdc2P43407 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sdc2P43407 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sdc2P43407 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.07■□□□□ 0.32
Sdc2P43407 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sdc2P43407 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Sdc2P43407 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc2P43407 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.07■□□□□ 0.32
Sdc2P43407 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Gm15358-201ENSMUST00000119249 520 ntBASIC17.06■□□□□ 0.32
Sdc2P43407 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Gm17807-201ENSMUST00000186869 298 ntBASIC17.06■□□□□ 0.32
Sdc2P43407 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.06■□□□□ 0.32
Sdc2P43407 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.06■□□□□ 0.32
Sdc2P43407 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sdc2P43407 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc2P43407 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.05■□□□□ 0.32
Sdc2P43407 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sdc2P43407 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sdc2P43407 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Sdc2P43407 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms