Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Hist1h1dP43277 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.9□□□□□ -0.35
Hist1h1dP43277 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Hist1h1dP43277 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Gm25016-201ENSMUST00000158399 131 ntBASIC12.89□□□□□ -0.35
Hist1h1dP43277 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Gm29518-201ENSMUST00000190858 372 ntBASIC12.89□□□□□ -0.35
Hist1h1dP43277 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.89□□□□□ -0.35
Hist1h1dP43277 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hist1h1dP43277 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Hist1h1dP43277 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm8344-201ENSMUST00000119813 856 ntBASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.88□□□□□ -0.35
Hist1h1dP43277 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.88□□□□□ -0.35
Hist1h1dP43277 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.88□□□□□ -0.35
Hist1h1dP43277 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.88□□□□□ -0.35
Hist1h1dP43277 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.88□□□□□ -0.35
Hist1h1dP43277 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hist1h1dP43277 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms