Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdx2P43241 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdx2P43241 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdx2P43241 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdx2P43241 Gm28630-201ENSMUST00000187806 498 ntBASIC14.39□□□□□ -0.11
Cdx2P43241 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdx2P43241 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdx2P43241 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdx2P43241 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdx2P43241 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdx2P43241 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdx2P43241 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdx2P43241 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdx2P43241 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdx2P43241 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdx2P43241 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cdx2P43241 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.39□□□□□ -0.11
Cdx2P43241 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdx2P43241 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cdx2P43241 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Gm18766-201ENSMUST00000189811 808 ntBASIC14.38□□□□□ -0.11
Cdx2P43241 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.38□□□□□ -0.11
Cdx2P43241 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.38□□□□□ -0.11
Cdx2P43241 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdx2P43241 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdx2P43241 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdx2P43241 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cdx2P43241 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdx2P43241 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.37□□□□□ -0.11
Cdx2P43241 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdx2P43241 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.37□□□□□ -0.11
Cdx2P43241 Gm7730-201ENSMUST00000212486 454 ntBASIC14.37□□□□□ -0.11
Cdx2P43241 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdx2P43241 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdx2P43241 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdx2P43241 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.37□□□□□ -0.11
Cdx2P43241 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cdx2P43241 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cdx2P43241 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdx2P43241 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms