Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.48□□□□□ -0.41
Timp3P39876 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.48□□□□□ -0.41
Timp3P39876 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.48□□□□□ -0.41
Timp3P39876 Gm11594-201ENSMUST00000122313 162 ntBASIC12.48□□□□□ -0.41
Timp3P39876 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.48□□□□□ -0.41
Timp3P39876 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.48□□□□□ -0.41
Timp3P39876 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.48□□□□□ -0.41
Timp3P39876 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.48□□□□□ -0.41
Timp3P39876 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Timp3P39876 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Timp3P39876 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.48□□□□□ -0.41
Timp3P39876 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Timp3P39876 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.48□□□□□ -0.41
Timp3P39876 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.47□□□□□ -0.41
Timp3P39876 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Timp3P39876 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.47□□□□□ -0.41
Timp3P39876 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.47□□□□□ -0.41
Timp3P39876 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Timp3P39876 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.47□□□□□ -0.41
Timp3P39876 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Timp3P39876 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Timp3P39876 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Timp3P39876 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Timp3P39876 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.46□□□□□ -0.41
Timp3P39876 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.46□□□□□ -0.41
Timp3P39876 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Timp3P39876 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Timp3P39876 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Gm14494-201ENSMUST00000118786 435 ntBASIC12.46□□□□□ -0.41
Timp3P39876 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.46□□□□□ -0.41
Timp3P39876 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.46□□□□□ -0.41
Timp3P39876 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Gm6736-201ENSMUST00000166583 948 ntBASIC12.46□□□□□ -0.41
Timp3P39876 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.46□□□□□ -0.41
Timp3P39876 Gm5682-201ENSMUST00000173402 505 ntBASIC12.46□□□□□ -0.41
Timp3P39876 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Timp3P39876 Mir8117-201ENSMUST00000184773 107 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms