Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.42■□□□□ 0.38
Vcam1P29533 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.42■□□□□ 0.38
Vcam1P29533 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vcam1P29533 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vcam1P29533 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vcam1P29533 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Vcam1P29533 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.41■□□□□ 0.38
Vcam1P29533 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Vcam1P29533 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.41■□□□□ 0.38
Vcam1P29533 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vcam1P29533 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.4■□□□□ 0.38
Vcam1P29533 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vcam1P29533 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.4■□□□□ 0.38
Vcam1P29533 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.4■□□□□ 0.38
Vcam1P29533 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vcam1P29533 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Vcam1P29533 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Vcam1P29533 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.39■□□□□ 0.37
Vcam1P29533 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.39■□□□□ 0.37
Vcam1P29533 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.39■□□□□ 0.37
Vcam1P29533 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.39■□□□□ 0.37
Vcam1P29533 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.39■□□□□ 0.37
Vcam1P29533 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vcam1P29533 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vcam1P29533 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcam1P29533 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcam1P29533 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcam1P29533 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcam1P29533 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcam1P29533 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vcam1P29533 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.38■□□□□ 0.37
Vcam1P29533 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.38■□□□□ 0.37
Vcam1P29533 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Vcam1P29533 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vcam1P29533 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms