Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.62■□□□□ 0.41
Pde6aP27664 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pde6aP27664 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pde6aP27664 Gm17968-201ENSMUST00000194902 784 ntBASIC17.61■□□□□ 0.41
Pde6aP27664 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pde6aP27664 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6aP27664 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pde6aP27664 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Gm12008-201ENSMUST00000117791 755 ntBASIC17.6■□□□□ 0.41
Pde6aP27664 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.6■□□□□ 0.41
Pde6aP27664 Gm43514-201ENSMUST00000198852 424 ntBASIC17.6■□□□□ 0.41
Pde6aP27664 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.6■□□□□ 0.41
Pde6aP27664 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pde6aP27664 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pde6aP27664 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6aP27664 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pde6aP27664 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pde6aP27664 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pde6aP27664 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pde6aP27664 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pde6aP27664 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.59■□□□□ 0.41
Pde6aP27664 Gm5177-201ENSMUST00000183092 997 ntBASIC17.59■□□□□ 0.41
Pde6aP27664 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.59■□□□□ 0.41
Pde6aP27664 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.59■□□□□ 0.41
Pde6aP27664 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pde6aP27664 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pde6aP27664 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6aP27664 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pde6aP27664 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.58■□□□□ 0.41
Pde6aP27664 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.58■□□□□ 0.41
Pde6aP27664 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6aP27664 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6aP27664 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Pde6aP27664 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6aP27664 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6aP27664 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6aP27664 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.58■□□□□ 0.4
Pde6aP27664 Gm43767-201ENSMUST00000198933 381 ntBASIC17.58■□□□□ 0.4
Pde6aP27664 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.58■□□□□ 0.4
Pde6aP27664 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pde6aP27664 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.58■□□□□ 0.4
Pde6aP27664 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms