Protein–RNA interactions for Protein: P21447

Abcb1a, Multidrug resistance protein 1A, mousemouse

Predictions only

Length 1,276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcb1aP21447 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Abcb1aP21447 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.15□□□□□ -0.14
Abcb1aP21447 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.15□□□□□ -0.14
Abcb1aP21447 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.15□□□□□ -0.14
Abcb1aP21447 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Abcb1aP21447 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Abcb1aP21447 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.15□□□□□ -0.14
Abcb1aP21447 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Abcb1aP21447 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcb1aP21447 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.14□□□□□ -0.15
Abcb1aP21447 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Abcb1aP21447 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcb1aP21447 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Gm8344-201ENSMUST00000119813 856 ntBASIC14.13□□□□□ -0.15
Abcb1aP21447 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Gm12134-201ENSMUST00000122109 520 ntBASIC14.13□□□□□ -0.15
Abcb1aP21447 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Gm18622-201ENSMUST00000219361 595 ntBASIC14.13□□□□□ -0.15
Abcb1aP21447 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.13□□□□□ -0.15
Abcb1aP21447 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.13□□□□□ -0.15
Abcb1aP21447 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Abcb1aP21447 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcb1aP21447 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcb1aP21447 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms