Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Fv4P11370 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.71□□□□□ -0.05
Fv4P11370 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.71□□□□□ -0.05
Fv4P11370 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.71□□□□□ -0.05
Fv4P11370 Gm6296-201ENSMUST00000222599 943 ntBASIC14.71□□□□□ -0.05
Fv4P11370 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fv4P11370 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Fv4P11370 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fv4P11370 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Fv4P11370 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fv4P11370 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.7□□□□□ -0.06
Fv4P11370 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.7□□□□□ -0.06
Fv4P11370 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.7□□□□□ -0.06
Fv4P11370 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.7□□□□□ -0.06
Fv4P11370 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Fv4P11370 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.7□□□□□ -0.06
Fv4P11370 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Fv4P11370 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fv4P11370 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.69□□□□□ -0.06
Fv4P11370 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Fv4P11370 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Fv4P11370 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Gm11780-201ENSMUST00000136880 516 ntBASIC14.69□□□□□ -0.06
Fv4P11370 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Fv4P11370 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.69□□□□□ -0.06
Fv4P11370 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Fv4P11370 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fv4P11370 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Fv4P11370 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Fv4P11370 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Fv4P11370 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.68□□□□□ -0.06
Fv4P11370 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.68□□□□□ -0.06
Fv4P11370 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.68□□□□□ -0.06
Fv4P11370 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.68□□□□□ -0.06
Fv4P11370 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.68□□□□□ -0.06
Fv4P11370 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Fv4P11370 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms