Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pax1P09084 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.38□□□□□ -0.43
Pax1P09084 Gm28745-201ENSMUST00000190069 305 ntBASIC12.38□□□□□ -0.43
Pax1P09084 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pax1P09084 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Pax1P09084 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pax1P09084 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.37□□□□□ -0.43
Pax1P09084 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Mir770-201ENSMUST00000103252 94 ntBASIC12.37□□□□□ -0.43
Pax1P09084 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pax1P09084 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.37□□□□□ -0.43
Pax1P09084 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pax1P09084 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.37□□□□□ -0.43
Pax1P09084 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.37□□□□□ -0.43
Pax1P09084 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.37□□□□□ -0.43
Pax1P09084 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.37□□□□□ -0.43
Pax1P09084 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Pax1P09084 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pax1P09084 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pax1P09084 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.37□□□□□ -0.43
Pax1P09084 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pax1P09084 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pax1P09084 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pax1P09084 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pax1P09084 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pax1P09084 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pax1P09084 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.36□□□□□ -0.43
Pax1P09084 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.36□□□□□ -0.43
Pax1P09084 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.36□□□□□ -0.43
Pax1P09084 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pax1P09084 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.36□□□□□ -0.43
Pax1P09084 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms