Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.18□□□□□ -0.14
Tuba1bP05213 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Tuba1bP05213 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.18□□□□□ -0.14
Tuba1bP05213 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.18□□□□□ -0.14
Tuba1bP05213 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tuba1bP05213 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.17□□□□□ -0.14
Tuba1bP05213 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Tuba1bP05213 Gm17807-201ENSMUST00000186869 298 ntBASIC14.17□□□□□ -0.14
Tuba1bP05213 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.17□□□□□ -0.14
Tuba1bP05213 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tuba1bP05213 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tuba1bP05213 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.17□□□□□ -0.14
Tuba1bP05213 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tuba1bP05213 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Mir3081-201ENSMUST00000175305 84 ntBASIC14.16□□□□□ -0.14
Tuba1bP05213 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.16□□□□□ -0.14
Tuba1bP05213 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tuba1bP05213 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tuba1bP05213 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tuba1bP05213 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tuba1bP05213 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Tuba1bP05213 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tuba1bP05213 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms