Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.33□□□□□ -0.44
P04940 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.33□□□□□ -0.44
P04940 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.33□□□□□ -0.44
P04940 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.33□□□□□ -0.44
P04940 Gm18195-201ENSMUST00000207604 706 ntBASIC12.33□□□□□ -0.44
P04940 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.33□□□□□ -0.44
P04940 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
P04940 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.33□□□□□ -0.44
P04940 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.33□□□□□ -0.44
P04940 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P04940 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.32□□□□□ -0.44
P04940 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.32□□□□□ -0.44
P04940 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P04940 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
P04940 Gm13036-201ENSMUST00000117799 748 ntBASIC12.32□□□□□ -0.44
P04940 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P04940 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.32□□□□□ -0.44
P04940 Gm4899-201ENSMUST00000178708 719 ntBASIC12.32□□□□□ -0.44
P04940 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.32□□□□□ -0.44
P04940 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.32□□□□□ -0.44
P04940 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
P04940 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
P04940 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
P04940 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.32□□□□□ -0.44
P04940 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.32□□□□□ -0.44
P04940 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04940 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.32□□□□□ -0.44
P04940 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
P04940 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
P04940 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
P04940 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.31□□□□□ -0.44
P04940 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.31□□□□□ -0.44
P04940 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P04940 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
P04940 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.31□□□□□ -0.44
P04940 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.31□□□□□ -0.44
P04940 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.31□□□□□ -0.44
P04940 Mir5126-201ENSMUST00000175513 77 ntBASIC12.31□□□□□ -0.44
P04940 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.31□□□□□ -0.44
P04940 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.31□□□□□ -0.44
P04940 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.31□□□□□ -0.44
P04940 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms