Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TcraP01849 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TcraP01849 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.14□□□□□ -0.63
TcraP01849 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TcraP01849 Gm13186-201ENSMUST00000118031 316 ntBASIC11.14□□□□□ -0.63
TcraP01849 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.14□□□□□ -0.63
TcraP01849 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.14□□□□□ -0.63
TcraP01849 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Gm5417-201ENSMUST00000079706 384 ntBASIC11.14□□□□□ -0.63
TcraP01849 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TcraP01849 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TcraP01849 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TcraP01849 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.14□□□□□ -0.63
TcraP01849 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TcraP01849 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TcraP01849 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.13□□□□□ -0.63
TcraP01849 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
TcraP01849 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.13□□□□□ -0.63
TcraP01849 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TcraP01849 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.13□□□□□ -0.63
TcraP01849 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.13□□□□□ -0.63
TcraP01849 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.13□□□□□ -0.63
TcraP01849 Gm21814-202ENSMUST00000203277 873 ntBASIC11.13□□□□□ -0.63
TcraP01849 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TcraP01849 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.13□□□□□ -0.63
TcraP01849 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TcraP01849 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.13□□□□□ -0.63
TcraP01849 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TcraP01849 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.13□□□□□ -0.63
TcraP01849 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TcraP01849 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TcraP01849 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
TcraP01849 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.12□□□□□ -0.63
TcraP01849 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TcraP01849 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.12□□□□□ -0.63
TcraP01849 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
TcraP01849 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
TcraP01849 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.12□□□□□ -0.63
TcraP01849 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.12□□□□□ -0.63
TcraP01849 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.12□□□□□ -0.63
TcraP01849 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.12□□□□□ -0.63
TcraP01849 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Gm30025-201ENSMUST00000218555 728 ntBASIC11.12□□□□□ -0.63
TcraP01849 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms