Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ifna1P01572 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ifna1P01572 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Gm12134-201ENSMUST00000122109 520 ntBASIC12.84□□□□□ -0.35
Ifna1P01572 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.84□□□□□ -0.35
Ifna1P01572 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.84□□□□□ -0.35
Ifna1P01572 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.84□□□□□ -0.35
Ifna1P01572 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ifna1P01572 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.84□□□□□ -0.35
Ifna1P01572 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Ifna1P01572 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ifna1P01572 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ifna1P01572 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ifna1P01572 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ifna1P01572 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ifna1P01572 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ifna1P01572 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Ifna1P01572 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ifna1P01572 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ifna1P01572 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ifna1P01572 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.83□□□□□ -0.36
Ifna1P01572 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.83□□□□□ -0.36
Ifna1P01572 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm8825-201ENSMUST00000182565 998 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm4518-201ENSMUST00000182638 718 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.83□□□□□ -0.36
Ifna1P01572 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ifna1P01572 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.83□□□□□ -0.36
Ifna1P01572 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ifna1P01572 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Ifna1P01572 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ifna1P01572 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Ifna1P01572 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ifna1P01572 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ifna1P01572 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ifna1P01572 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ifna1P01572 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ifna1P01572 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ifna1P01572 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ifna1P01572 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ifna1P01572 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ifna1P01572 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ifna1P01572 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ifna1P01572 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ifna1P01572 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms