Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a20bO88575 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a20bO88575 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.52■□□□□ 0.23
Slc6a20bO88575 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a20bO88575 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a20bO88575 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.52■□□□□ 0.23
Slc6a20bO88575 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a20bO88575 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Shd-206ENSMUST00000225145 998 ntBASIC16.51■□□□□ 0.23
Slc6a20bO88575 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.51■□□□□ 0.23
Slc6a20bO88575 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a20bO88575 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.5■□□□□ 0.23
Slc6a20bO88575 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.5■□□□□ 0.23
Slc6a20bO88575 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.5■□□□□ 0.23
Slc6a20bO88575 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Mir7085-201ENSMUST00000184353 66 ntBASIC16.5■□□□□ 0.23
Slc6a20bO88575 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a20bO88575 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Gm11478-201ENSMUST00000117851 599 ntBASIC16.49■□□□□ 0.23
Slc6a20bO88575 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.49■□□□□ 0.23
Slc6a20bO88575 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.49■□□□□ 0.23
Slc6a20bO88575 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.49■□□□□ 0.23
Slc6a20bO88575 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a20bO88575 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.49■□□□□ 0.23
Slc6a20bO88575 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Gm24543-201ENSMUST00000103867 82 ntBASIC16.48■□□□□ 0.23
Slc6a20bO88575 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.48■□□□□ 0.23
Slc6a20bO88575 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.48■□□□□ 0.23
Slc6a20bO88575 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms