Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.04□□□□□ -0.32
Cldn1O88551 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cldn1O88551 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cldn1O88551 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cldn1O88551 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.04□□□□□ -0.32
Cldn1O88551 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.04□□□□□ -0.32
Cldn1O88551 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.04□□□□□ -0.32
Cldn1O88551 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cldn1O88551 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cldn1O88551 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cldn1O88551 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Cldn1O88551 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cldn1O88551 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cldn1O88551 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cldn1O88551 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cldn1O88551 Grk6-207ENSMUST00000225925 2769 ntBASIC13.03□□□□□ -0.32
Cldn1O88551 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cldn1O88551 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cldn1O88551 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.03□□□□□ -0.32
Cldn1O88551 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.03□□□□□ -0.32
Cldn1O88551 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.03□□□□□ -0.32
Cldn1O88551 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Cldn1O88551 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.03□□□□□ -0.32
Cldn1O88551 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cldn1O88551 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cldn1O88551 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cldn1O88551 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldn1O88551 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cldn1O88551 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cldn1O88551 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cldn1O88551 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cldn1O88551 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cldn1O88551 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cldn1O88551 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.02□□□□□ -0.33
Cldn1O88551 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cldn1O88551 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.02□□□□□ -0.33
Cldn1O88551 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.02□□□□□ -0.33
Cldn1O88551 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Thap2-203ENSMUST00000218989 527 ntBASIC13.02□□□□□ -0.33
Cldn1O88551 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.02□□□□□ -0.33
Cldn1O88551 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.02□□□□□ -0.33
Cldn1O88551 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.02□□□□□ -0.33
Cldn1O88551 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cldn1O88551 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cldn1O88551 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cldn1O88551 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms