Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vti1bO88384 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vti1bO88384 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.53□□□□□ -0.08
Vti1bO88384 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vti1bO88384 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Gm25406-201ENSMUST00000157599 105 ntBASIC14.53□□□□□ -0.08
Vti1bO88384 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Vti1bO88384 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1bO88384 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.53□□□□□ -0.08
Vti1bO88384 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Vti1bO88384 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1bO88384 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1bO88384 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1bO88384 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1bO88384 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Vti1bO88384 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1bO88384 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1bO88384 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Vti1bO88384 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.52□□□□□ -0.09
Vti1bO88384 Gm27867-201ENSMUST00000184778 125 ntBASIC14.52□□□□□ -0.09
Vti1bO88384 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.52□□□□□ -0.09
Vti1bO88384 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.52□□□□□ -0.09
Vti1bO88384 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Vti1bO88384 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vti1bO88384 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Vti1bO88384 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Vti1bO88384 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.52□□□□□ -0.09
Vti1bO88384 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1bO88384 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Vti1bO88384 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.51□□□□□ -0.09
Vti1bO88384 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.51□□□□□ -0.09
Vti1bO88384 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vti1bO88384 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.51□□□□□ -0.09
Vti1bO88384 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Vti1bO88384 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1bO88384 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.5□□□□□ -0.09
Vti1bO88384 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Vti1bO88384 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Vti1bO88384 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vti1bO88384 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.5□□□□□ -0.09
Vti1bO88384 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.5□□□□□ -0.09
Vti1bO88384 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.5□□□□□ -0.09
Vti1bO88384 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1bO88384 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms