Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Stx1aO35526 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stx1aO35526 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Stx1aO35526 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Stx1aO35526 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stx1aO35526 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Stx1aO35526 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.11■□□□□ 0.33
Stx1aO35526 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.11■□□□□ 0.33
Stx1aO35526 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.11■□□□□ 0.33
Stx1aO35526 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Stx1aO35526 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Stx1aO35526 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Stx1aO35526 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.11■□□□□ 0.33
Stx1aO35526 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Stx1aO35526 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Stx1aO35526 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.1■□□□□ 0.33
Stx1aO35526 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.1■□□□□ 0.33
Stx1aO35526 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Mir3081-201ENSMUST00000175305 84 ntBASIC17.1■□□□□ 0.33
Stx1aO35526 Gm44454-201ENSMUST00000198541 138 ntBASIC17.1■□□□□ 0.33
Stx1aO35526 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.1■□□□□ 0.33
Stx1aO35526 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.1■□□□□ 0.33
Stx1aO35526 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stx1aO35526 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Stx1aO35526 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Stx1aO35526 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Grk6-207ENSMUST00000225925 2769 ntBASIC17.09■□□□□ 0.33
Stx1aO35526 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Stx1aO35526 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Stx1aO35526 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Stx1aO35526 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Stx1aO35526 Mir6982-201ENSMUST00000184354 68 ntBASIC17.09■□□□□ 0.33
Stx1aO35526 Gm29518-201ENSMUST00000190858 372 ntBASIC17.09■□□□□ 0.33
Stx1aO35526 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Stx1aO35526 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Stx1aO35526 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.09■□□□□ 0.33
Stx1aO35526 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Stx1aO35526 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Stx1aO35526 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stx1aO35526 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms