Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.8■□□□□ 0.12
Ebf3O08791 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ebf3O08791 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ebf3O08791 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.8■□□□□ 0.12
Ebf3O08791 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ebf3O08791 Mir1895-201ENSMUST00000122615 79 ntBASIC15.8■□□□□ 0.12
Ebf3O08791 Gm5177-201ENSMUST00000183092 997 ntBASIC15.8■□□□□ 0.12
Ebf3O08791 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.8■□□□□ 0.12
Ebf3O08791 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ebf3O08791 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.8■□□□□ 0.12
Ebf3O08791 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ebf3O08791 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Ebf3O08791 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ebf3O08791 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.79■□□□□ 0.12
Ebf3O08791 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.79■□□□□ 0.12
Ebf3O08791 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.79■□□□□ 0.12
Ebf3O08791 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Ebf3O08791 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ebf3O08791 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.79■□□□□ 0.12
Ebf3O08791 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.79■□□□□ 0.12
Ebf3O08791 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.79■□□□□ 0.12
Ebf3O08791 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ebf3O08791 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.78■□□□□ 0.12
Ebf3O08791 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ebf3O08791 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.78■□□□□ 0.12
Ebf3O08791 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.78■□□□□ 0.12
Ebf3O08791 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.78■□□□□ 0.12
Ebf3O08791 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.78■□□□□ 0.12
Ebf3O08791 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.78■□□□□ 0.12
Ebf3O08791 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.78■□□□□ 0.12
Ebf3O08791 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Ebf3O08791 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ebf3O08791 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ebf3O08791 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Ebf3O08791 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ebf3O08791 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.77■□□□□ 0.12
Ebf3O08791 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.77■□□□□ 0.12
Ebf3O08791 Gm15427-201ENSMUST00000117288 531 ntBASIC15.77■□□□□ 0.12
Ebf3O08791 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.77■□□□□ 0.12
Ebf3O08791 Gm27301-201ENSMUST00000184012 127 ntBASIC15.77■□□□□ 0.12
Ebf3O08791 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ebf3O08791 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ebf3O08791 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ebf3O08791 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ebf3O08791 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.77■□□□□ 0.11
Ebf3O08791 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ebf3O08791 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Ebf3O08791 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ebf3O08791 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ebf3O08791 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ebf3O08791 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ebf3O08791 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ebf3O08791 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ebf3O08791 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ebf3O08791 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms