Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp35M0QWN7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp35M0QWN7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Usp35M0QWN7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp35M0QWN7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp35M0QWN7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp35M0QWN7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp35M0QWN7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.33■□□□□ 0.21
Usp35M0QWN7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm23935-201ENSMUST00000102303 57 ntBASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm24270-201ENSMUST00000102326 57 ntBASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm14822-201ENSMUST00000122247 291 ntBASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm24245-201ENSMUST00000157318 57 ntBASIC16.33■□□□□ 0.2
Usp35M0QWN7 Mir3113-201ENSMUST00000175478 76 ntBASIC16.33■□□□□ 0.2
Usp35M0QWN7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm10175-201ENSMUST00000086013 645 ntBASIC16.33■□□□□ 0.2
Usp35M0QWN7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp35M0QWN7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Gm15358-201ENSMUST00000119249 520 ntBASIC16.32■□□□□ 0.2
Usp35M0QWN7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.32■□□□□ 0.2
Usp35M0QWN7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp35M0QWN7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Gm10576-201ENSMUST00000191927 825 ntBASIC16.31■□□□□ 0.2
Usp35M0QWN7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.31■□□□□ 0.2
Usp35M0QWN7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms