Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.67■□□□□ 0.1
Trim55G3X8Y1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim55G3X8Y1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Gm2559-201ENSMUST00000201323 363 ntBASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim55G3X8Y1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim55G3X8Y1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim55G3X8Y1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim55G3X8Y1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim55G3X8Y1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim55G3X8Y1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim55G3X8Y1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim55G3X8Y1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim55G3X8Y1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim55G3X8Y1 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms