Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh11xF6ZNL5 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Efs-202ENSMUST00000227037 2540 ntBASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh11xF6ZNL5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Gm27525-201ENSMUST00000184465 107 ntBASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Gm43767-201ENSMUST00000198933 381 ntBASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh11xF6ZNL5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh11xF6ZNL5 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh11xF6ZNL5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms