Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Tcf21-202ENSMUST00000218002 1788 ntBASIC20.62■□□□□ 0.89
Zc3h13E9Q784 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h13E9Q784 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h13E9Q784 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Zc3h13E9Q784 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC20.62■□□□□ 0.89
Zc3h13E9Q784 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h13E9Q784 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h13E9Q784 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Gm17420-201ENSMUST00000164753 153 ntBASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Gm10478-201ENSMUST00000084451 396 ntBASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h13E9Q784 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 AC114008.2-201ENSMUST00000227699 1347 ntBASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Ldha-ps-201ENSMUST00000119390 995 ntBASIC20.6■□□□□ 0.89
Zc3h13E9Q784 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Gm42693-201ENSMUST00000196779 631 ntBASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Mir125a-201ENSMUST00000083545 68 ntBASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h13E9Q784 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Mir3102-201ENSMUST00000175555 104 ntBASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h13E9Q784 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Mir6392-201ENSMUST00000184924 108 ntBASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Olfr286-202ENSMUST00000205305 969 ntBASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h13E9Q784 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.58■□□□□ 0.88
Zc3h13E9Q784 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h13E9Q784 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Zc3h13E9Q784 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms