Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccnb1ip1D3Z3K2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm18666-201ENSMUST00000190039 958 ntBASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccnb1ip1D3Z3K2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ccnb1ip1D3Z3K2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccnb1ip1D3Z3K2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccnb1ip1D3Z3K2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccnb1ip1D3Z3K2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Ccnb1ip1D3Z3K2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms