Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rd3lB2RV38 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3lB2RV38 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Gm13836-201ENSMUST00000121159 501 ntBASIC13.3□□□□□ -0.28
Rd3lB2RV38 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Gm29518-201ENSMUST00000190858 372 ntBASIC13.3□□□□□ -0.28
Rd3lB2RV38 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Rd3lB2RV38 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.3□□□□□ -0.28
Rd3lB2RV38 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3lB2RV38 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.29□□□□□ -0.28
Rd3lB2RV38 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 AA414768-201ENSMUST00000121924 1257 ntBASIC13.29□□□□□ -0.28
Rd3lB2RV38 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.29□□□□□ -0.28
Rd3lB2RV38 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3lB2RV38 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.28□□□□□ -0.28
Rd3lB2RV38 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3lB2RV38 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3lB2RV38 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.28□□□□□ -0.28
Rd3lB2RV38 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3lB2RV38 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3lB2RV38 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3lB2RV38 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3lB2RV38 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms